Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920592.1_cds_XP_016469697.1_62223
CDS Infomation

[gene=LOC107792036] [db_xref=GeneID:107792036] [protein=1-aminocyclopropane-1-carboxylate synthase 3] [protein_id=XP_016469697.1] [location=join(13831..13977,14084..14215,14349..14509,14625..15597)] [gbkey=CDS]
Sequence

ATGAAGCTGCTGTCAGAGAAAGCCACGTGCAACTCTCACGGACAAGATTCTTCATACTTC
CTAGGATGGCAGGAGTATGAGAAAAACCCATACGATGAAGTTCAGAATCCTAAAGGAATC
ATCCAGATGGGTCTTGCAGAGAATCAGCTCTCTTTCGATTTATTAGAATCATGGCTAGCA
CAAAACCCAGACGCAGCTGGGTTTAAGAGAAATGGAGAGTCAATATTCAGAGAGCTTGCT
CTGTTTCAAGATTACCATGGCCTTCCGGCTTTCAAGAATGCAATGACTAAATTCATGTCA
GAAATCAGAGGCAATAAAGTAAGCTTTGATTCGAACAAGCTCGTTCTTACAGCCGGTGCA
ACTTCCGCAAATGAAACGCTCATGTTTTGCCTAGCTGACCAAGGCGACGCTTTTCTCCTT
CCTACCCCATACTACCCTGGATTCGACAGAGACCTCAAATGGAGAACTGGAGCTGAGATT
GTGCCAATACAGTGCACAAGTTCAAATGGCTTCAGAATTACAGAATCCGCTCTTGAAGAA
GCTTTTCTAGAAGCCAAAAGGCGAAATCTTAGAGTGAAAGGGGTTCTAGTGACCAACCCA
TCAAATCCACTGGGTACAACACTAAGCCGAAACGAGCTTGAGCTGCTTCTTACTTTCATT
GACGCAAAAGGTATCCATCTCATTAGTGACGAGATCTATTCGGGGACTGTTTTTAACTCG
CCTAGCTTCGTCAGTGTCATGGAAGTTCTAATGGAAAAGAACTACATGAAAACCGAAGTT
TGGGAACGAGTTCACATTGTTTACAGTCTTTCGAAAGATCTTGGCCTTCCCGGTTTTAGA
GTTGGTGCAATTTACTCCAACGACGAGATGGTTGTCTCTGCGGCAACAAAGATGTCCAGT
TTCGGTTTAGTTTCTTCCCAAACTCAGTACCTTCTATCAGCCATGCTCTCCGACAAAAAA
TTCACGAAAAAATACATCTCTGAAAATCAAAAGAGGCTAAAGAAACGACATGCAATGCTT
GTACGAGGTCTTAAAAATGCCGGTATTAGCTGCCTCGAAAGCAATGCTGGTTTATTTTGT
TGGGTTGACATGAGGCATTTACTAAGCTCTAACACATTTGAAGCTGAAATTGACTTATGG
AAGAAAATAGTGTACGATGTTGGCCTAAACATTTCGCCTGGATCATCATGCCATTGTAAC
GAACCAGGTTGGCTTCGTGCATGTTTTGCTAACATGTCCGAGGATACACTAAACCTCGCC
ATGCGACGTATGAAGGCTTTTGTGGAGTCCACTGCTACCAATAATCCAAGTCACCAAACT
TATCAACAGTCTAACACAACAAGTTCAAAGAAGAAGTCATTCTCCAAGTGGGTTTTTCGG
CTATCGTTTAACGACCGTCAAAGAGAACGATAG

Peptide Sequence

PEP ID

XP_016469697.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 3 [Nicotiana tabacum]
Sequence

MKLLSEKATCNSHGQDSSYFLGWQEYEKNPYDEVQNPKGIIQMGLAENQLSFDLLESWLA
QNPDAAGFKRNGESIFRELALFQDYHGLPAFKNAMTKFMSEIRGNKVSFDSNKLVLTAGA
TSANETLMFCLADQGDAFLLPTPYYPGFDRDLKWRTGAEIVPIQCTSSNGFRITESALEE
AFLEAKRRNLRVKGVLVTNPSNPLGTTLSRNELELLLTFIDAKGIHLISDEIYSGTVFNS
PSFVSVMEVLMEKNYMKTEVWERVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSS
FGLVSSQTQYLLSAMLSDKKFTKKYISENQKRLKKRHAMLVRGLKNAGISCLESNAGLFC
WVDMRHLLSSNTFEAEIDLWKKIVYDVGLNISPGSSCHCNEPGWLRACFANMSEDTLNLA
MRRMKAFVESTATNNPSHQTYQQSNTTSSKKKSFSKWVFRLSFNDRQRER

Transcript Sequence

Gene sequence data has not been registered.